BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C03SP1|AL425825
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 1569 0.0
>3x_Contig1145
Length = 5226
Score = 1569 bits (791), Expect = 0.0
Identities = 792/793 (99%)
Strand = Plus / Plus
Query: 1 agaacgcgttgatgcwattgatgatcaagtgagaaggacccagatggatcttgagagttt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 agaacgcgttgatgcaattgatgatcaagtgagaaggacccagatggatcttgagagttt 1295
Query: 61 agtgtcaagaagttcaaataacaataaacacttacaaagtttgcttctttcttcgaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 agtgtcaagaagttcaaataacaataaacacttacaaagtttgcttctttcttcgaagga 1355
Query: 121 tatcaaggaattgcacgacgtattggataaattgagtgtgcaacagcatgaacagatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 tatcaaggaattgcacgacgtattggataaattgagtgtgcaacagcatgaacagatgga 1415
Query: 181 aaagaaccgcgatgtggagtctgttttgacgcggttaatggagaaacagtctttggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 aaagaaccgcgatgtggagtctgttttgacgcggttaatggagaaacagtctttggaatt 1475
Query: 241 aaaatcatcgatggaaaacgttgaaattcagacattggaacagaaaattagtcaattgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 aaaatcatcgatggaaaacgttgaaattcagacattggaacagaaaattagtcaattgga 1535
Query: 301 ggccaagtctgggaaactggagtcccttgatgctcaggtcatcgcaaaggagaaacaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 ggccaagtctgggaaactggagtcccttgatgctcaggtcatcgcaaaggagaaacaatt 1595
Query: 361 ggcaataattgaaacaaaattacaggaaaggaaggaaagatttgatgagctacgacaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 ggcaataattgaaacaaaattacaggaaaggaaggaaagatttgatgagctacgacaaag 1655
Query: 421 ggcgaaagaagtacaatcatctttacaagatgatttactgacccgttacaagacagttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 ggcgaaagaagtacaatcatctttacaagatgatttactgacccgttacaagacagttca 1715
Query: 481 cgatactatgtctgtttctatggcgaatttggccaatggatctcgcccagcgggaaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 cgatactatgtctgtttctatggcgaatttggccaatggatctcgcccagcgggaaacac 1775
Query: 541 atcacgtgtagccagtttgctacgaaataaatatatgaatgacacattcaatggaaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 atcacgtgtagccagtttgctacgaaataaatatatgaatgacacattcaatggaaatag 1835
Query: 601 acgagtaatatcgttaaacgagccaagaccttcatcgtcttctgcatttgatagcatacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1836 acgagtaatatcgttaaacgagccaagaccttcatcgtcttctgcatttgatagcatacc 1895
Query: 661 gcagaataactctgattttgaagattcttcataagattccatatacaatcgataagtaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 gcagaataactctgattttgaagattcttcataagattccatatacaatcgataagtaaa 1955
Query: 721 cgctatcatcttatgtggaaatgcatcttcacattgcagtagaaggtttacttgatctga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 cgctatcatcttatgtggaaatgcatcttcacattgcagtagaaggtttacttgatctga 2015
Query: 781 aggaaagggatca 793
|||||||||||||
Sbjct: 2016 aggaaagggatca 2028
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6675
Number of Sequences: 1807
Number of extensions: 6675
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)